Installing dependency packages

Before installing scibet, the following packages should be installed first:

install.packages("Rcpp")
install.packages("RcppEigen")
install.packages("ggsci")
install.packages("viridis")
install.packages("tidyverse")

Installing SciBet

SciBet is now available for linux platform. The R package can be downloaded here. To install, run:

# Enter the command in linux (bash)
# This step should be implemented in the default path of R library
R CMD INSTALL scibet_1.0.tar.gz

Or SciBet could be installed using Rstudio: “Tools” -> “Install packages” -> “Install from: Package Archive File (.tar.gz)”.

Then SciBet can be used in R or R studio

library(scibet)

If you have any problems during the installation of SciBet, please refer to FAQ